泛素化和磷酸化修饰介导poly(I:C)调控巨噬细胞脂质代谢

Ubiquitination and phosphorylation modifications mediate the macrophage lipid metabolism elicited by poly(I:C)

  • 摘要:
    目标 确定泛素化、磷酸化以及N/O-糖基化修饰是否参与dsRNA病毒诱导的脂质代谢过程。
    方法 通过percoll密度梯度离心的方式分离出草鱼头肾原代巨噬细胞,使用poly(I:C)刺激模拟dsRNA病毒的感染;利用蛋白质谱与修饰组学技术对刺激前后差异蛋白进行鉴定、GO功能与KEGG通路富集分析。
    结果 脂质代谢相关通路中,泛素化修饰差异蛋白中共计15个蛋白,富集到8个脂质代谢相关通路;磷酸化修饰差异蛋白共计1个蛋白,即cPLA2,富集到1条脂质代谢通路;N/O-糖基化修饰差异蛋白中未检测到主要的脂质代谢通路。进一步对16个差异蛋白表达水平进行分析发现,poly(I:C)刺激后,泛素化修饰水平下调最为显著的蛋白为巨噬细胞ACOX1与HADHA,上调最为显著的蛋白为DAGLα、ABCA1和PLD1,表明ACOX1、HADHA、DAGLα、ABCA1、PLD1及cPLA2可能是poly(I:C)通过蛋白修饰调控脂质代谢的关键蛋白。
    结论 本研究揭示了泛素化与磷酸化修饰是病毒的dsRNA调控脂质代谢与脂滴合成的重要手段,强调了脂质代谢相关蛋白修饰在病毒dsRNA调控感染中的重要作用。

     

    Abstract: Lipid droplets (LDs) are important organelles in the viral lifecycle, and viruses can regulate lipid metabolism and LD synthesis through various mechanisms. Ubiquitination, phosphorylation, and glycosylation are classic protein modifications known to participate in the regulation of host lipid metabolism. However, it remains unclear whether dsRNA viruses can manipulate lipid metabolism through protein modifications. To investigate the roles of ubiquitination, phosphorylation, and N/O-glycosylation modifications in the lipid metabolism process induced by dsRNA viruses, we conducted preliminary explorations using proteomics and modificationomics techniques. Initially, primary kidney macrophages were isolated from Ctenopharyngodon idella using a percoll density gradient centrifugation and stimulated with poly(I:C) to simulate dsRNA virus infection. Subsequently, differential proteins in the three modificationomics types were investigated, and GO function and KEGG pathway enrichment were performed. The results revealed that 2 080 ubiquitinated proteins including 224 phosphorylation-modified differential proteins were identified in ubiquitination mass spectrometry. 8 lipid metabolism-related pathways encompassing 15 proteins were enriched in ubiquitination-modified differential proteins. Among all pathways enriched in ubiquitin modification proteomics, lipid metabolism pathways were significantly enriched. Phosphorylation modification mass spectrometry detected 1 415 phosphorylated proteins, including 139 differential phosphorylated proteins. The phosphorylated differential proteins were enriched in only 1 lipid metabolism pathway and 1 significantly upregulated protein cytosolic phospholipase A2 (cPLA2). N/O-glycosylation mass spectrometry analysis identified 371 N-glycosylated proteins and 243 O-glycosylated proteins. Differential expression analysis revealed 368 N-glycosylated differential proteins and 120 O-glycosylated differential proteins but no major lipid metabolism pathway was enriched among these differential proteins. Further, the expression levels of the 16 differential modification proteins showed that ACOX1 and HADHA were the most significantly down-regulated proteins in terms of ubiquitination modification following poly(I:C) stimulation, while DAGLα, ABCA1, and PLD1 were the most significantly up-regulated proteins. The results suggested that ACOX1, HADHA, DAGLα, ABCA1, PLD1, and cPLA2 may be the key modification proteins in the lipid metabolism induced by poly(I:C). In summary, the present study demonstrated that ubiquitination and phosphorylation modifications play a crucial role in the lipid metabolism and lipid droplet synthesis in viral dsRNA stimulation, underlying the important role of lipid metabolism-related protein modifications in viral dsRNA infections.

     

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