草鱼呼肠孤病毒Taq Man real-time PCR检测方法的建立

Establishment of a Taq Man real-time PCR assay for detecting the grass carp reovirus

  • 摘要: 利用RT-PCR技术扩增出草鱼呼肠孤病毒(GCRV)VP6蛋白编码区长度为1 250 bp的片段,克隆到pEGFP-N1载体上,构建重组质粒pEGFP-N1-VP6。经PCR鉴定确认正确后,以10倍梯度稀释pEGFP-N1-VP6重组质粒,作为标准模板进行TaqMan real-time PCR扩增,制作标准曲线,建立了草鱼呼肠孤病毒的荧光定量PCR检测方法。检测结果显示,标准曲线的相关系数(R2)达到0.998 09,斜率为-3.373;对初始模板定量检测的范围为1×101~1×106 copies/μL;特异性试验结果表明,该方法可特异性地检测出草鱼呼肠孤病毒,而对鲤春病毒血症病毒(SVCV)、传染性造血器官坏死症病毒(IHNV)无检测信号。本研究建立的草鱼呼肠孤病毒Taq Man real-time PCR方法灵敏度高、特异性强,可进行定量分析,对草鱼出血病快速诊断与病毒病原定量检测有重要意义。

     

    Abstract: A 1 250 bp coding region of grass carp reovirus(GCRV)VP6 protein was amplified by RT-PCR and cloned into pEGFP-N1 vector for the construction of recombinant plasmid pEGFP-N1-VP6.After being identified and confirmed by PCR reaction with specific primer paires,10-fold serial dilutions of plasmid pEGFP-N1-VP6 were used as standard templates for Taq Man real-time PCR to quantify the virus genomic copy number and generate standard curve.Herein,a Taq Man real-time PCR of detecting GCRV was developed.It had a good linear relationship between the initial templates and Ct values with a detection range from 1×101 copies/μL to 1×106 copies/μL,the correlation coefficient(R2)was 0.998 09 and the slope value of standard curve was -3.373.The assay for specificity of the method established revealed that the TaqMan real-time PCR had a specific detection of GCRV,but had no detection signals to spring viremia carp virus(SVCV)and infectious hematopoietic necrosis virus(IHNV).The Taq Man real-time RT-PCR assay described here with high sensitivity and accuracy is considered to be a powerful tool for the rapid detection and quantification of GCRV both in vivo and in vitro.

     

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